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August 8, 2023 10:29
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nix log /nix/store/jrs8lbd4k43cdja9bgsahw1lkgj88pz5-python3.11-skorch-0.14.0.drv
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Sourcing python-remove-tests-dir-hook | |
Sourcing python-catch-conflicts-hook.sh | |
Sourcing python-remove-bin-bytecode-hook.sh | |
Sourcing setuptools-build-hook | |
Using setuptoolsBuildPhase | |
Using setuptoolsShellHook | |
Sourcing pip-install-hook | |
Using pipInstallPhase | |
Sourcing python-imports-check-hook.sh | |
Using pythonImportsCheckPhase | |
Sourcing python-namespaces-hook | |
Sourcing python-catch-conflicts-hook.sh | |
Sourcing setuptools-check-hook | |
Using setuptoolsCheckPhase | |
Sourcing pytest-check-hook | |
Using pytestCheckPhase | |
Removing setuptoolsCheckPhase | |
@nix { "action": "setPhase", "phase": "unpackPhase" } | |
unpacking sources | |
unpacking source archive /nix/store/mwnr9bl32r062ckgn097w5sfyacf8p7q-skorch-0.14.0.tar.gz | |
source root is skorch-0.14.0 | |
setting SOURCE_DATE_EPOCH to timestamp 1687793238 of file skorch-0.14.0/setup.cfg | |
@nix { "action": "setPhase", "phase": "patchPhase" } | |
patching sources | |
@nix { "action": "setPhase", "phase": "updateAutotoolsGnuConfigScriptsPhase" } | |
updateAutotoolsGnuConfigScriptsPhase | |
@nix { "action": "setPhase", "phase": "configurePhase" } | |
configuring | |
no configure script, doing nothing | |
@nix { "action": "setPhase", "phase": "buildPhase" } | |
building | |
Executing setuptoolsBuildPhase | |
/nix/store/lm2fgfw9iqs5wy45g2nc4anbfm2zz5zf-python3.11-setuptools-67.4.0/lib/python3.11/site-packages/setuptools/dist.py:788: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead | |
warnings.warn( | |
running bdist_wheel | |
running build | |
running build_py | |
creating build | |
creating build/lib | |
creating build/lib/skorch | |
copying skorch/classifier.py -> build/lib/skorch | |
copying skorch/_doctor.py -> build/lib/skorch | |
copying skorch/history.py -> build/lib/skorch | |
copying skorch/__init__.py -> build/lib/skorch | |
copying skorch/setter.py -> build/lib/skorch | |
copying skorch/_version.py -> build/lib/skorch | |
copying skorch/probabilistic.py -> build/lib/skorch | |
copying skorch/toy.py -> build/lib/skorch | |
copying skorch/cli.py -> build/lib/skorch | |
copying skorch/exceptions.py -> build/lib/skorch | |
copying skorch/scoring.py -> build/lib/skorch | |
copying skorch/helper.py -> build/lib/skorch | |
copying skorch/hf.py -> build/lib/skorch | |
copying skorch/regressor.py -> build/lib/skorch | |
copying skorch/utils.py -> build/lib/skorch | |
copying skorch/dataset.py -> build/lib/skorch | |
copying skorch/net.py -> build/lib/skorch | |
creating build/lib/skorch/llm | |
copying skorch/llm/classifier.py -> build/lib/skorch/llm | |
copying skorch/llm/prompts.py -> build/lib/skorch/llm | |
copying skorch/llm/__init__.py -> build/lib/skorch/llm | |
creating build/lib/skorch/callbacks | |
copying skorch/callbacks/__init__.py -> build/lib/skorch/callbacks | |
copying skorch/callbacks/regularization.py -> build/lib/skorch/callbacks | |
copying skorch/callbacks/base.py -> build/lib/skorch/callbacks | |
copying skorch/callbacks/training.py -> build/lib/skorch/callbacks | |
copying skorch/callbacks/logging.py -> build/lib/skorch/callbacks | |
copying skorch/callbacks/lr_scheduler.py -> build/lib/skorch/callbacks | |
copying skorch/callbacks/scoring.py -> build/lib/skorch/callbacks | |
creating build/lib/skorch/tests | |
copying skorch/tests/test_utils.py -> build/lib/skorch/tests | |
copying skorch/tests/test_dataset.py -> build/lib/skorch/tests | |
copying skorch/tests/test_doctor.py -> build/lib/skorch/tests | |
copying skorch/tests/test_regressor.py -> build/lib/skorch/tests | |
copying skorch/tests/__init__.py -> build/lib/skorch/tests | |
copying skorch/tests/test_setter.py -> build/lib/skorch/tests | |
copying skorch/tests/test_net.py -> build/lib/skorch/tests | |
copying skorch/tests/test_scoring.py -> build/lib/skorch/tests | |
copying skorch/tests/test_helper.py -> build/lib/skorch/tests | |
copying skorch/tests/test_probabilistic.py -> build/lib/skorch/tests | |
copying skorch/tests/test_history.py -> build/lib/skorch/tests | |
copying skorch/tests/test_classifier.py -> build/lib/skorch/tests | |
copying skorch/tests/test_cli.py -> build/lib/skorch/tests | |
copying skorch/tests/test_hf.py -> build/lib/skorch/tests | |
copying skorch/tests/conftest.py -> build/lib/skorch/tests | |
copying skorch/tests/test_toy.py -> build/lib/skorch/tests | |
running egg_info | |
writing skorch.egg-info/PKG-INFO | |
writing dependency_links to skorch.egg-info/dependency_links.txt | |
writing requirements to skorch.egg-info/requires.txt | |
writing top-level names to skorch.egg-info/top_level.txt | |
reading manifest file 'skorch.egg-info/SOURCES.txt' | |
reading manifest template 'MANIFEST.in' | |
adding license file 'LICENSE' | |
writing manifest file 'skorch.egg-info/SOURCES.txt' | |
/nix/store/lm2fgfw9iqs5wy45g2nc4anbfm2zz5zf-python3.11-setuptools-67.4.0/lib/python3.11/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. | |
warnings.warn( | |
installing to build/bdist.linux-x86_64/wheel | |
running install | |
running install_lib | |
creating build/bdist.linux-x86_64 | |
creating build/bdist.linux-x86_64/wheel | |
creating build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/classifier.py -> build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/_doctor.py -> build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/history.py -> build/bdist.linux-x86_64/wheel/skorch | |
creating build/bdist.linux-x86_64/wheel/skorch/llm | |
copying build/lib/skorch/llm/classifier.py -> build/bdist.linux-x86_64/wheel/skorch/llm | |
copying build/lib/skorch/llm/prompts.py -> build/bdist.linux-x86_64/wheel/skorch/llm | |
copying build/lib/skorch/llm/__init__.py -> build/bdist.linux-x86_64/wheel/skorch/llm | |
creating build/bdist.linux-x86_64/wheel/skorch/callbacks | |
copying build/lib/skorch/callbacks/__init__.py -> build/bdist.linux-x86_64/wheel/skorch/callbacks | |
copying build/lib/skorch/callbacks/regularization.py -> build/bdist.linux-x86_64/wheel/skorch/callbacks | |
copying build/lib/skorch/callbacks/base.py -> build/bdist.linux-x86_64/wheel/skorch/callbacks | |
copying build/lib/skorch/callbacks/training.py -> build/bdist.linux-x86_64/wheel/skorch/callbacks | |
copying build/lib/skorch/callbacks/logging.py -> build/bdist.linux-x86_64/wheel/skorch/callbacks | |
copying build/lib/skorch/callbacks/lr_scheduler.py -> build/bdist.linux-x86_64/wheel/skorch/callbacks | |
copying build/lib/skorch/callbacks/scoring.py -> build/bdist.linux-x86_64/wheel/skorch/callbacks | |
copying build/lib/skorch/__init__.py -> build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/setter.py -> build/bdist.linux-x86_64/wheel/skorch | |
creating build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/test_utils.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/test_dataset.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/test_doctor.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/test_regressor.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/__init__.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/test_setter.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/test_net.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/test_scoring.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/test_helper.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/test_probabilistic.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/test_history.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/test_classifier.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/test_cli.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/test_hf.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/conftest.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/tests/test_toy.py -> build/bdist.linux-x86_64/wheel/skorch/tests | |
copying build/lib/skorch/_version.py -> build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/probabilistic.py -> build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/toy.py -> build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/cli.py -> build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/exceptions.py -> build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/scoring.py -> build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/helper.py -> build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/hf.py -> build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/regressor.py -> build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/utils.py -> build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/dataset.py -> build/bdist.linux-x86_64/wheel/skorch | |
copying build/lib/skorch/net.py -> build/bdist.linux-x86_64/wheel/skorch | |
running install_egg_info | |
Copying skorch.egg-info to build/bdist.linux-x86_64/wheel/skorch-0.14.0-py3.11.egg-info | |
running install_scripts | |
creating build/bdist.linux-x86_64/wheel/skorch-0.14.0.dist-info/WHEEL | |
creating 'dist/skorch-0.14.0-py3-none-any.whl' and adding 'build/bdist.linux-x86_64/wheel' to it | |
adding 'skorch/__init__.py' | |
adding 'skorch/_doctor.py' | |
adding 'skorch/_version.py' | |
adding 'skorch/classifier.py' | |
adding 'skorch/cli.py' | |
adding 'skorch/dataset.py' | |
adding 'skorch/exceptions.py' | |
adding 'skorch/helper.py' | |
adding 'skorch/hf.py' | |
adding 'skorch/history.py' | |
adding 'skorch/net.py' | |
adding 'skorch/probabilistic.py' | |
adding 'skorch/regressor.py' | |
adding 'skorch/scoring.py' | |
adding 'skorch/setter.py' | |
adding 'skorch/toy.py' | |
adding 'skorch/utils.py' | |
adding 'skorch/callbacks/__init__.py' | |
adding 'skorch/callbacks/base.py' | |
adding 'skorch/callbacks/logging.py' | |
adding 'skorch/callbacks/lr_scheduler.py' | |
adding 'skorch/callbacks/regularization.py' | |
adding 'skorch/callbacks/scoring.py' | |
adding 'skorch/callbacks/training.py' | |
adding 'skorch/llm/__init__.py' | |
adding 'skorch/llm/classifier.py' | |
adding 'skorch/llm/prompts.py' | |
adding 'skorch/tests/__init__.py' | |
adding 'skorch/tests/conftest.py' | |
adding 'skorch/tests/test_classifier.py' | |
adding 'skorch/tests/test_cli.py' | |
adding 'skorch/tests/test_dataset.py' | |
adding 'skorch/tests/test_doctor.py' | |
adding 'skorch/tests/test_helper.py' | |
adding 'skorch/tests/test_hf.py' | |
adding 'skorch/tests/test_history.py' | |
adding 'skorch/tests/test_net.py' | |
adding 'skorch/tests/test_probabilistic.py' | |
adding 'skorch/tests/test_regressor.py' | |
adding 'skorch/tests/test_scoring.py' | |
adding 'skorch/tests/test_setter.py' | |
adding 'skorch/tests/test_toy.py' | |
adding 'skorch/tests/test_utils.py' | |
adding 'skorch-0.14.0.dist-info/LICENSE' | |
adding 'skorch-0.14.0.dist-info/METADATA' | |
adding 'skorch-0.14.0.dist-info/WHEEL' | |
adding 'skorch-0.14.0.dist-info/top_level.txt' | |
adding 'skorch-0.14.0.dist-info/RECORD' | |
removing build/bdist.linux-x86_64/wheel | |
Finished executing setuptoolsBuildPhase | |
@nix { "action": "setPhase", "phase": "installPhase" } | |
installing | |
Executing pipInstallPhase | |
/build/skorch-0.14.0/dist /build/skorch-0.14.0 | |
Processing ./skorch-0.14.0-py3-none-any.whl | |
Requirement already satisfied: numpy>=1.13.3 in /nix/store/1hwymyhafpll583mli5avr6qnlas4747-python3.11-numpy-1.24.2/lib/python3.11/site-packages (from skorch==0.14.0) (1.24.2) | |
Requirement already satisfied: scikit-learn>=0.22.0 in /nix/store/fl5xmpkij4vi9h0gxqd3as97k4f5gviy-python3.11-scikit-learn-1.2.1/lib/python3.11/site-packages (from skorch==0.14.0) (1.2.1) | |
Requirement already satisfied: scipy>=1.1.0 in /nix/store/64n0wgp2mjwmgg2hm50zg889hpaizp8y-python3.11-scipy-1.10.1/lib/python3.11/site-packages (from skorch==0.14.0) (1.10.1) | |
Requirement already satisfied: tabulate>=0.7.7 in /nix/store/ajffg24g1g12qpn3y2qa2jngb9yzwjid-python3.11-tabulate-0.9.0/lib/python3.11/site-packages (from skorch==0.14.0) (0.9.0) | |
Requirement already satisfied: tqdm>=4.14.0 in /nix/store/djvavwp3f4af5f3flfrgvc983hghj6vh-python3.11-tqdm-4.64.1/lib/python3.11/site-packages (from skorch==0.14.0) (4.64.1) | |
Requirement already satisfied: joblib>=1.1.1 in /nix/store/rq2am5hxxzrjqzz2hck0gkj9mfjvmc1x-python3.11-joblib-1.2.0/lib/python3.11/site-packages (from scikit-learn>=0.22.0->skorch==0.14.0) (1.2.0) | |
Requirement already satisfied: threadpoolctl>=2.0.0 in /nix/store/b646q0y6g99qbs4fc0spb8i5xllrfzvd-python3.11-threadpoolctl-3.1.0/lib/python3.11/site-packages (from scikit-learn>=0.22.0->skorch==0.14.0) (3.1.0) | |
Installing collected packages: skorch | |
Successfully installed skorch-0.14.0 | |
/build/skorch-0.14.0 | |
Finished executing pipInstallPhase | |
@nix { "action": "setPhase", "phase": "pythonOutputDistPhase" } | |
pythonOutputDistPhase | |
Executing pythonOutputDistPhase | |
Finished executing pythonOutputDistPhase | |
@nix { "action": "setPhase", "phase": "fixupPhase" } | |
post-installation fixup | |
shrinking RPATHs of ELF executables and libraries in /nix/store/7vdhclillilnz3y9ww2417pdnmxxhjm5-python3.11-skorch-0.14.0 | |
checking for references to /build/ in /nix/store/7vdhclillilnz3y9ww2417pdnmxxhjm5-python3.11-skorch-0.14.0... | |
patching script interpreter paths in /nix/store/7vdhclillilnz3y9ww2417pdnmxxhjm5-python3.11-skorch-0.14.0 | |
stripping (with command strip and flags -S -p) in /nix/store/7vdhclillilnz3y9ww2417pdnmxxhjm5-python3.11-skorch-0.14.0/lib | |
shrinking RPATHs of ELF executables and libraries in /nix/store/k8vbjz02ifw0w64vwlm5m39d384z8bd5-python3.11-skorch-0.14.0-dist | |
checking for references to /build/ in /nix/store/k8vbjz02ifw0w64vwlm5m39d384z8bd5-python3.11-skorch-0.14.0-dist... | |
patching script interpreter paths in /nix/store/k8vbjz02ifw0w64vwlm5m39d384z8bd5-python3.11-skorch-0.14.0-dist | |
Executing pythonRemoveTestsDir | |
Finished executing pythonRemoveTestsDir | |
@nix { "action": "setPhase", "phase": "installCheckPhase" } | |
running install tests | |
no Makefile or custom installCheckPhase, doing nothing | |
@nix { "action": "setPhase", "phase": "pythonCatchConflictsPhase" } | |
pythonCatchConflictsPhase | |
@nix { "action": "setPhase", "phase": "pythonRemoveBinBytecodePhase" } | |
pythonRemoveBinBytecodePhase | |
@nix { "action": "setPhase", "phase": "pythonImportsCheckPhase" } | |
pythonImportsCheckPhase | |
Executing pythonImportsCheckPhase | |
Check whether the following modules can be imported: skorch | |
@nix { "action": "setPhase", "phase": "pytestCheckPhase" } | |
pytestCheckPhase | |
Executing pytestCheckPhase | |
[1m============================= test session starts ==============================[0m | |
platform linux -- Python 3.11.4, pytest-7.2.1, pluggy-1.0.0 | |
rootdir: /build/skorch-0.14.0, configfile: setup.cfg | |
plugins: flaky-3.7.0 | |
[1mcollecting ... [0m[1m collecting 220 items [0m[1m collecting 738 items [0m[1m collected 930 items / 3 deselected / 1 skipped / 927 selected [0m | |
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=================================== FAILURES =================================== | |
[31m[1m______________ TestTorchCompile.test_fit_and_predict_with_compile ______________[0m | |
self = <skorch.tests.test_net.TestTorchCompile object at 0x7ffd9d6fbe10> | |
net_cls = <class 'skorch.classifier.NeuralNetClassifier'> | |
module_cls = functools.partial(<class 'skorch.toy.MLPModule'>, output_nonlin=Softmax(dim=-1), input_units=20, hidden_units=10, num_hidden=2, dropout=0.5) | |
data = (array([[-0.9658346 , -2.1890705 , 0.16985609, ..., -0.89645284, | |
0.3759244 , -1.0849651 ], | |
[-0.454767..., 0, 1, | |
1, 0, 0, 1, 1, 0, 0, 1, 1, 1, 0, 1, 0, 1, 1, 1, 1, 0, 0, 1, 1, 0, | |
0, 1, 1, 0, 1, 0, 1, 0, 1, 0])) | |
def test_fit_and_predict_with_compile(self, net_cls, module_cls, data): | |
if not hasattr(torch, 'compile'): | |
pytest.skip(reason="torch.compile not available") | |
# use real torch.compile, not mocked, can be a bit slow | |
X, y = data | |
> net = net_cls(module_cls, max_epochs=1, compile=True).initialize() | |
[1m[31mskorch/tests/test_net.py[0m:4116: | |
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | |
[1m[31mskorch/net.py[0m:886: in initialize | |
self._initialize_module() | |
[1m[31mskorch/net.py[0m:737: in _initialize_module | |
module = self.torch_compile(module, name=name) | |
[1m[31mskorch/net.py[0m:790: in torch_compile | |
module_compiled = torch.compile(module, **params) | |
[1m[31m/nix/store/fbrhsbafgfpxwj1p4vaj7ic72f5ffiif-python3.11-torch-2.0.1/lib/python3.11/site-packages/torch/__init__.py[0m:1441: in compile | |
return torch._dynamo.optimize(backend=backend, nopython=fullgraph, dynamic=dynamic, disable=disable)(model) | |
[1m[31m/nix/store/fbrhsbafgfpxwj1p4vaj7ic72f5ffiif-python3.11-torch-2.0.1/lib/python3.11/site-packages/torch/_dynamo/eval_frame.py[0m:413: in optimize | |
check_if_dynamo_supported() | |
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ | |
def check_if_dynamo_supported(): | |
if sys.platform == "win32": | |
raise RuntimeError("Windows not yet supported for torch.compile") | |
if sys.version_info >= (3, 11): | |
> raise RuntimeError("Python 3.11+ not yet supported for torch.compile") | |
[1m[31mE RuntimeError: Python 3.11+ not yet supported for torch.compile[0m | |
[1m[31m/nix/store/fbrhsbafgfpxwj1p4vaj7ic72f5ffiif-python3.11-torch-2.0.1/lib/python3.11/site-packages/torch/_dynamo/eval_frame.py[0m:377: RuntimeError | |
[33m=============================== warnings summary ===============================[0m | |
skorch/dataset.py:109 | |
/build/skorch-0.14.0/skorch/dataset.py:109: DeprecationWarning: invalid escape sequence '\s' | |
"""General dataset wrapper that can be used in conjunction with | |
skorch/dataset.py:172 | |
/build/skorch-0.14.0/skorch/dataset.py:172: DeprecationWarning: invalid escape sequence '\s' | |
"""Additional transformations on ``X`` and ``y``. | |
skorch/tests/test_classifier.py::TestNeuralNetBinaryClassifier::test_grid_search_with_roc_auc | |
skorch/tests/test_classifier.py::TestNeuralNetBinaryClassifier::test_grid_search_with_roc_auc | |
skorch/tests/test_classifier.py::TestNeuralNetBinaryClassifier::test_grid_search_with_roc_auc | |
skorch/tests/test_classifier.py::TestNeuralNetBinaryClassifier::test_grid_search_with_roc_auc | |
skorch/tests/test_classifier.py::TestNeuralNetBinaryClassifier::test_grid_search_with_roc_auc | |
skorch/tests/test_classifier.py::TestNeuralNetBinaryClassifier::test_grid_search_with_roc_auc | |
/nix/store/fl5xmpkij4vi9h0gxqd3as97k4f5gviy-python3.11-scikit-learn-1.2.1/lib/python3.11/site-packages/sklearn/model_selection/_validation.py:778: UserWarning: Scoring failed. The score on this train-test partition for these parameters will be set to nan. Details: | |
Traceback (most recent call last): | |
File "/nix/store/fl5xmpkij4vi9h0gxqd3as97k4f5gviy-python3.11-scikit-learn-1.2.1/lib/python3.11/site-packages/sklearn/metrics/_scorer.py", line 373, in _score | |
y_pred = method_caller(clf, "decision_function", X) | |
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ | |
File "/nix/store/fl5xmpkij4vi9h0gxqd3as97k4f5gviy-python3.11-scikit-learn-1.2.1/lib/python3.11/site-packages/sklearn/metrics/_scorer.py", line 73, in _cached_call | |
return getattr(estimator, method)(*args, **kwargs) | |
^^^^^^^^^^^^^^^^^^^^^^^^^^ | |
AttributeError: 'NeuralNetBinaryClassifier' object has no attribute 'decision_function' | |
During handling of the above exception, another exception occurred: | |
Traceback (most recent call last): | |
File "/nix/store/fl5xmpkij4vi9h0gxqd3as97k4f5gviy-python3.11-scikit-learn-1.2.1/lib/python3.11/site-packages/sklearn/model_selection/_validation.py", line 767, in _score | |
scores = scorer(estimator, X_test, y_test) | |
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ | |
File "/nix/store/fl5xmpkij4vi9h0gxqd3as97k4f5gviy-python3.11-scikit-learn-1.2.1/lib/python3.11/site-packages/sklearn/metrics/_scorer.py", line 234, in __call__ | |
return self._score( | |
^^^^^^^^^^^^ | |
File "/nix/store/fl5xmpkij4vi9h0gxqd3as97k4f5gviy-python3.11-scikit-learn-1.2.1/lib/python3.11/site-packages/sklearn/metrics/_scorer.py", line 390, in _score | |
y_pred = self._select_proba_binary(y_pred, clf.classes_) | |
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ | |
File "/nix/store/fl5xmpkij4vi9h0gxqd3as97k4f5gviy-python3.11-scikit-learn-1.2.1/lib/python3.11/site-packages/sklearn/metrics/_scorer.py", line 190, in _select_proba_binary | |
col_idx = np.flatnonzero(classes == pos_label)[0] | |
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^^^ | |
IndexError: index 0 is out of bounds for axis 0 with size 0 | |
warnings.warn( | |
skorch/tests/test_classifier.py::TestNeuralNetBinaryClassifier::test_grid_search_with_roc_auc | |
/nix/store/fl5xmpkij4vi9h0gxqd3as97k4f5gviy-python3.11-scikit-learn-1.2.1/lib/python3.11/site-packages/sklearn/model_selection/_search.py:952: UserWarning: One or more of the test scores are non-finite: [nan nan] | |
warnings.warn( | |
skorch/tests/test_net.py: 10 warnings | |
/build/skorch-0.14.0/skorch/callbacks/training.py:201: UserWarning: Checkpoint monitor parameter is set to 'epoch_3_scorer' and the history contains 'epoch_3_scorer_best'. Perhaps you meant to set the parameter to 'epoch_3_scorer_best' | |
warnings.warn( | |
skorch/tests/test_net.py::TestNeuralNet::test_reinitializing_module_optimizer_message[kwargs3-Re-initializing criterion because the following parameters were re-set: criterion__reduce, criterion__size_average.\nRe-initializing optimizer.] | |
skorch/tests/test_net.py::TestNeuralNet::test_set_params_on_custom_criterion_triggers_reinit_of_optimizer | |
skorch/tests/test_net.py::TestNeuralNet::test_set_params_on_custom_criterion_with_default_criterion_params_msg | |
/nix/store/fbrhsbafgfpxwj1p4vaj7ic72f5ffiif-python3.11-torch-2.0.1/lib/python3.11/site-packages/torch/nn/_reduction.py:42: UserWarning: size_average and reduce args will be deprecated, please use reduction='none' instead. | |
warnings.warn(warning.format(ret)) | |
skorch/tests/test_net.py::TestNeuralNet::test_reinitializing_module_optimizer_message[kwargs4-Re-initializing module because the following parameters were re-set: module__input_units.\nRe-initializing criterion.\nRe-initializing optimizer.] | |
skorch/tests/test_net.py::TestNeuralNet::test_set_params_on_custom_criterion_triggers_reinit_of_optimizer | |
/nix/store/fbrhsbafgfpxwj1p4vaj7ic72f5ffiif-python3.11-torch-2.0.1/lib/python3.11/site-packages/torch/nn/_reduction.py:42: UserWarning: size_average and reduce args will be deprecated, please use reduction='mean' instead. | |
warnings.warn(warning.format(ret)) | |
skorch/tests/test_net.py::TestNeuralNet::test_custom_criterion_attribute_name_predict_works | |
skorch/tests/test_net.py::TestNeuralNet::test_predict_nonlinearity_is_identity_with_multiple_criteria | |
/nix/store/fl5xmpkij4vi9h0gxqd3as97k4f5gviy-python3.11-scikit-learn-1.2.1/lib/python3.11/site-packages/sklearn/model_selection/_split.py:700: UserWarning: The least populated class in y has only 3 members, which is less than n_splits=5. | |
warnings.warn( | |
-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html | |
===Flaky Test Report=== | |
test_fit_lbfgs_optimizer failed (4 runs remaining out of 5). | |
<class 'AssertionError'> | |
assert 7.572632312774658 < 1.0 | |
[<TracebackEntry /build/skorch-0.14.0/skorch/tests/test_net.py:2459>] | |
test_fit_lbfgs_optimizer failed (3 runs remaining out of 5). | |
<class 'AssertionError'> | |
assert 7.572632312774658 < 1.0 | |
[<TracebackEntry /build/skorch-0.14.0/skorch/tests/test_net.py:2459>] | |
test_fit_lbfgs_optimizer failed (2 runs remaining out of 5). | |
<class 'AssertionError'> | |
assert 7.572632312774658 < 1.0 | |
[<TracebackEntry /build/skorch-0.14.0/skorch/tests/test_net.py:2459>] | |
test_fit_lbfgs_optimizer passed 1 out of the required 1 times. Success! | |
===End Flaky Test Report=== | |
[36m[1m=========================== short test summary info ============================[0m | |
[31mFAILED[0m skorch/tests/test_net.py::[1mTestTorchCompile::test_fit_and_predict_with_compile[0m - RuntimeError: Python 3.11+ not yet supported for torch.compile | |
[31m= [31m[1m1 failed[0m, [32m824 passed[0m, [33m102 skipped[0m, [33m3 deselected[0m, [33m1 xfailed[0m, [33m26 warnings[0m[31m in 202.72s (0:03:22)[0m[31m =[0m | |
/nix/store/7aprjn0yf6p06krg4087sxvilfp4c8yy-stdenv-linux/setup: line 1596: pop_var_context: head of shell_variables not a function context |
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